CDS
| Accession Number | TCMCG066C09197 |
| gbkey | CDS |
| Protein Id | XP_034580098.1 |
| Location | join(46000485..46000804,46000879..46000936,46001028..46001150,46001812..46001911,46002012..46002048,46002144..46002249,46002506..46002563,46002670..46002767,46002869..46002988,46003446..46003488,46003862..46003989,46004065..46004192,46004271..46004787,46004874..46004966,46005661..46005846,46005920..46006130,46006959..46007080,46007200..46007343,46007797..46007928,46008009..46008294,46008546..46008784,46008913..46009005) |
| Gene | LOC117843566 |
| GeneID | 117843566 |
| Organism | Setaria viridis |
Protein
| Length | 1113aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034724207.1 |
| Definition | protein transport protein SEC31 homolog B isoform X3 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | WD40 repeats |
| KEGG_TC | - |
| KEGG_Module |
M00404
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14005
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04141
[VIEW IN KEGG] map04141 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005829 [VIEW IN EMBL-EBI] GO:0005911 [VIEW IN EMBL-EBI] GO:0009506 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0030054 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0055044 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGTGCATCAAGAGCGCGCAGCGGGCGGCGCTGACGGCGCTGGCGCCGGACGCGCCGTACCTCGCCGCCGGCACCATGAGCGGCGCCGTCGACATCAGCTTCTCCGCGTCCGCCAACATCGAGATCTTCCGCCTCGACTTCCAGTCCGACTCCCCGGACCTCCCGCTCCTCGCCTCCGCGCCTTCCCCGGACCGCTTCAACCGCCTCTCCTGGTCGCGCCCGGGCGCGGTGGAGGGTGACTCCTACGCGCTGGGCCTCCTCGCCGGAGGCCTCAGCGACGGCTCCGTCGCCGTGTGGAACCCGCTGAGCATGATCAGCTCCGAGGGGAAAGCGGAGGATGCTATGGTCGCGCGGCTGGAGAAGCACACCGGGGCGGTTTGTGGATTGGAGTTTAGCGAGCTCACGCCGAATCGGCTCGCTTCAGGGGCTGAGCAGGGGGAGCTTTGCATCTGGGATCTCAAGAACCCAGTCGAGCCAGTAGTGTACCCACCACTCAAGCAGAGTGTTGGTTCCAGCGCCCAAGCAGAAATCTCTTGTTTATCCTGGAATCCCAAGTTTCAACATATATTAGCAACCACATCTACTAATGGGATGACAGTTGTTTGGGATTTAAGGAACCAGAAACCACTGACTAGCTTTTCAGATTCTATTAGAAGGAAATCCTCTGTTCTTCAATGGAACCCAGACATGTCCACCCAACTGATTGTTGCATCAGATGACGATAGCTCACCCTCACTGAGAGTTTGGGATGTGAGGAAGACCATTTCACCTGTAAGAGAATTTGTTGGCCATTCAAAAGGCGTGATTGCTATGTCCTGGTGCCCTTACGACAGTTCGTTCTTGCTTACATGTTCCAAAGACAATAGAACAATATGCTGGGATACTGTTAGTGGAGAGATTATTAGTGAGCTACCAACCAGCGATAATTGGAATTTTGACCTTCACTGGTATCGAAAAATTCCAGGCGTCATAGCAGCATCCTCGTTTGATGGGAAAATTGGTATATACAACCTAGAGTTCTCTGGACTTTATGCAGCTGGTGATGCTGGTGGTGCCCCAGCATGTCCAAGAGCTCCAGCTCCAAAATGGTTGAAATGCCCCACTGGTGCATCTTTTGGCTTTGGTGGTAAACTTGTTGCTTTCCATCCAGCAGCACCCACCCAAGGCGCACAAGCGTCTACTTCTGAGGTGCATGTACACAATTTGGTGATTGAGCAAAGTTTGGTGAGCCGGTCAACTGAATTTGAAGCTGCTATACAGAATGGTGACAAGAGTTCGCTGCGTGCTCTGTGTGAAAAAAAATCACAAGAATCATTATCTGATGAGGAGAGAGAAACATGGGGCTTCTTAAGGGTTATGTTTGAGGATGGGGATGTTGCAAGGACAAAATTACTTGCTCATCTTGGCTTTGAACCGCCTCAGGCACCAACTGTGGATTCAACTGATGAACTGAGCCAAACATTGGCGGATACACTTAATCTTGATCATGGCACAGCAACCGATAATGCGGATGCTCAATTTCTTGTCGATAACGGGGATGATTTTTTCAATAACCCTCAACCTTCAGAGGCTAGCTTAGCTGAAGAATCAATTTCTACAAATGGTGAACAGATAGAGCAGGAAATACCTGGAGATGTTGTGCCATCTGATCCATCAATTGACAAGAGCATTCAACATGCATTGGTTGTTGGAGACTACAAAGGTGCAGTTAACCAGTGCCTTGCTGCAAATCGTATGGCTGATGCTCTGGTTATTGCCCATGCTGGTGGTTCTGCTCTATGGGAAAGCACAAGAAATCAGTATCTTAGAAAGAGTATCTCGCCCTACTTAAAGGTTGTTTCTGCTATGGTGGGCAATGATTTAATGAGTTTCGTGAGTACTTGGCCACTAAGTTCGTGGAAAGAAACTCTTGCGCTACTGTGCACATTTGCGCGGAAAGAGGAATGGAATGTTTTGTGTGACACACTTGCATCTAGACTCCTCAGTGTTGGAGATACACTAGCTGCAACTCTCTGTTACATCTGTGCTGGAAATATTGACAAAGCTGTGGAAATATGGTCTCGCAACTTGAAGTCTGAAGATGGGGGGCAGACTTATGTTGATCTTCTCCAGGATTTGATGGAAAAGACCATTACTCTCGCCCTTGCTACAGGCCACAAGAGATTTAGCGCGTCACTTTCTAAGCTTGTTGAGAACTATGCTGAACTGTTGGCCAGTCAAGGTCTTCTTAAGACTGCAATGGAGTATTTGAAACTGTTGGGATCAGATGAGCATTCACATGAGCTGGCAATTTTGAGAGATAGAATTGCACTTTCTACAGAAGAGGTACACTTTCCAGAGAATGATGCTGCTAGGAGTTCTTTGTCTGATAGTACTGGCGCCAGTTCCCCCTATGTCACAAATCATAGTTATATCACCCAAGACCAGCCTCAGAATCTTCACCAGGTACAATCGTATAATCTGCATAGTAGCACATATTCAGATGGTTACCATCAACAATCTAATGCAGCCTTTGCATACAACAACCCATATCAACCTCAACCACAATCTCAAATGTTTGTTCCACCAAGTGCACCGATCAGCTCTCAGCTACCACAAGGTTCTGCTCCTGTACAGGCACCACCGCAAACAGTAAAGACATTTACTCCTGCAAACCCAATGGGTCTGAAAAACGCAGAACAATATCACCAACCTAATACCTTGGGTTCCCAGCTTTACATGCCTGCTGCAAACCAGCCATATTCTACTCCACCAGTCCCTTCTCTTGGTCCTACTGCCTCTGTACCAGGAACGGTCCCTAACCAGATGTTTCCCCATTCTGCTGCAACTAACTCAACGGCCAGGTTTATGCCATCAACCAATCAAGGCTTTGTTCAGAGGCCTGGCTTGAGTCCTGCGCAGCCCTCAAGTCCAACACAGGCACAGGCACAGGCACAAGCACAGGCACAAGCAGCTCCTCCTGCACCTCCCCCGACTGTGCAGACAGCTGATACATCTAAGGTGTCTGGTGAATTGAGGCCTGTTATTGCAACATTGACCAGATTGTTTGATGAGACATCCAAAGCCCTTGGGGGTTCACAAGCTACTCAGGCAAAAAAGCGTGAAATCGAAGACAATTCCAGGAAAATAGGGGCATTGTTCGCCAAACTAAATAGTGGCGACATATCTCCAAATGTTTCATCAAAACTCATTCAGCTGTGCAGTGCACTTGATAGTAGTGATTTTGCCACGGCGATGCACCTCCAGGTAATCTTGACAACAAGTGACTGGGATGAGTGCAACTTTTGGCTTGCGGCATTGAAGCGTATGATCAAGACACGGCAGAACTTCAGAATGTAA |
| Protein: MACIKSAQRAALTALAPDAPYLAAGTMSGAVDISFSASANIEIFRLDFQSDSPDLPLLASAPSPDRFNRLSWSRPGAVEGDSYALGLLAGGLSDGSVAVWNPLSMISSEGKAEDAMVARLEKHTGAVCGLEFSELTPNRLASGAEQGELCIWDLKNPVEPVVYPPLKQSVGSSAQAEISCLSWNPKFQHILATTSTNGMTVVWDLRNQKPLTSFSDSIRRKSSVLQWNPDMSTQLIVASDDDSSPSLRVWDVRKTISPVREFVGHSKGVIAMSWCPYDSSFLLTCSKDNRTICWDTVSGEIISELPTSDNWNFDLHWYRKIPGVIAASSFDGKIGIYNLEFSGLYAAGDAGGAPACPRAPAPKWLKCPTGASFGFGGKLVAFHPAAPTQGAQASTSEVHVHNLVIEQSLVSRSTEFEAAIQNGDKSSLRALCEKKSQESLSDEERETWGFLRVMFEDGDVARTKLLAHLGFEPPQAPTVDSTDELSQTLADTLNLDHGTATDNADAQFLVDNGDDFFNNPQPSEASLAEESISTNGEQIEQEIPGDVVPSDPSIDKSIQHALVVGDYKGAVNQCLAANRMADALVIAHAGGSALWESTRNQYLRKSISPYLKVVSAMVGNDLMSFVSTWPLSSWKETLALLCTFARKEEWNVLCDTLASRLLSVGDTLAATLCYICAGNIDKAVEIWSRNLKSEDGGQTYVDLLQDLMEKTITLALATGHKRFSASLSKLVENYAELLASQGLLKTAMEYLKLLGSDEHSHELAILRDRIALSTEEVHFPENDAARSSLSDSTGASSPYVTNHSYITQDQPQNLHQVQSYNLHSSTYSDGYHQQSNAAFAYNNPYQPQPQSQMFVPPSAPISSQLPQGSAPVQAPPQTVKTFTPANPMGLKNAEQYHQPNTLGSQLYMPAANQPYSTPPVPSLGPTASVPGTVPNQMFPHSAATNSTARFMPSTNQGFVQRPGLSPAQPSSPTQAQAQAQAQAQAAPPAPPPTVQTADTSKVSGELRPVIATLTRLFDETSKALGGSQATQAKKREIEDNSRKIGALFAKLNSGDISPNVSSKLIQLCSALDSSDFATAMHLQVILTTSDWDECNFWLAALKRMIKTRQNFRM |